Transcript: ENSDART00000146424.3 BIN1-202

Description

bridging integrator 1a [Source:ZFIN;Acc:ZDB-GENE-070912-715]

Location

Chromosome 9: 7,423,916-7,444,753 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 17 domains and features, is associated with 819 variant alleles and maps to 173 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000042114.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000081606.5	BIN1-204	1530	509aa	ENSDARP00000076047.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000165091.2	BIN1-203	1515	504aa	ENSDARP00000137018.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000146424.3	BIN1-202	1309	382aa	ENSDARP00000116878.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000144600.3	BIN1-201	579	192aa	ENSDARP00000120092.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 1,309 bps, Translation length: 382 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000146424.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000146424.3 BIN1-202

Summary

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Transcript: ENSDART00000146424.3 BIN1-202

Summary

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