Transcript: ENSDART00000146423.2 st3gal3b-206

Description

ST3 beta-galactoside alpha-2,3-sialyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-050411-13]

Gene Synonyms

SIAT6, im:6892850, st3gal3-r1, st3gal3l

Location

Chromosome 2: 17,353,831-17,392,719 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 1036 variant alleles and maps to 76 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000015252.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000141188.4	st3gal3b-205	2068	356aa	ENSDARP00000112587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FBG1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000123137.3	st3gal3b-202	1699	356aa	ENSDARP00000110277.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FBG1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000100201.5	st3gal3b-201	1446	356aa	ENSDARP00000090974.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FBG1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136470.2	st3gal3b-204	926	238aa	ENSDARP00000119998.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000134951.3	st3gal3b-203	556	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000146423.2	st3gal3b-206	518	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 518 bps,

Version

ENSDART00000146423.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000146423.2 st3gal3b-206

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Transcript: ENSDART00000146423.2 st3gal3b-206

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