Transcript: ENSDART00000146362.2 cacnb2b-204

Description

calcium channel, voltage-dependent, beta 2b [Source:ZFIN;Acc:ZDB-GENE-050208-129]

Gene Synonyms

CAB2a, CACNB2.2, cacnb2a, im:7141271, si:dkey-32m20.2

Location

Chromosome 2: 31,503,305-31,511,614 forward strand.

About this transcript

This transcript has 5 exons, is associated with 172 variant alleles and maps to 67 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000055565.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000130722.4	cacnb2b-203	1897	377aa	ENSDARP00000109412.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2SZ53	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000049219.7	cacnb2b-201	1131	377aa	ENSDARP00000049218.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2SZ53	-
ENSDART00000123495.3	cacnb2b-202	1101	367aa	ENSDARP00000104581.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EYY0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000146362.2	cacnb2b-204	702	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 702 bps,

Version

ENSDART00000146362.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

dotter confirmed [Definitions]

Transcript: ENSDART00000146362.2 cacnb2b-204

Summary

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Transcript: ENSDART00000146362.2 cacnb2b-204

Summary

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