Transcript: ENSDART00000146327.2 sgk1-204

Description

serum/glucocorticoid regulated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2860]

Location

Chromosome 23: 31,644,534-31,693,309 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 10 domains and features, is associated with 822 variant alleles and maps to 99 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000025522.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000035031.7	sgk1-201	2320	433aa	ENSDARP00000031762.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZTW4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146327.2	sgk1-204	1143	305aa	ENSDARP00000121789.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133569.3	sgk1-202	845	264aa	ENSDARP00000118538.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000145621.3	sgk1-203	799	229aa	ENSDARP00000120935.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147156.2	sgk1-205	844	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000148122.2	sgk1-206	649	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,143 bps, Translation length: 305 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000146327.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000146327.2 sgk1-204

Summary

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Transcript: ENSDART00000146327.2 sgk1-204

Summary

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