Transcript: ENSDART00000146189.3 raver1-202

Description

ribonucleoprotein, PTB-binding 1 [Source:ZFIN;Acc:ZDB-GENE-050522-99]

Location

About this transcript

This transcript has 3 exons, is annotated with 14 domains and features, is associated with 332 variant alleles and maps to 185 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000127832.4	raver1-201	3886	725aa	ENSDARP00000109981.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FAA3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146189.3	raver1-202	1343	322aa	ENSDARP00000123654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q561	-
ENSDART00000151035.2	raver1-203	370	124aa	ENSDARP00000125832.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,343 bps, Translation length: 322 residues

Version

ENSDART00000146189.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.