Transcript: ENSDART00000146165.3 rusc1-203

Description

RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]

Gene Synonyms

si:dkey-85k15.9

Location

About this transcript

This transcript has 9 exons, is annotated with 19 domains and features, is associated with 718 variant alleles and maps to 64 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146165.3	rusc1-203	2209	610aa	ENSDARP00000114438.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QJK3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000132075.3	rusc1-201	855	285aa	ENSDARP00000117826.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QXY3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000135844.3	rusc1-202	810	244aa	ENSDARP00000120300.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QGV4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,209 bps, Translation length: 610 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000146165.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]