Transcript: ENSDART00000146088.2 si:ch211-223a10.1-202

Description

si:ch211-223a10.1 [Source:ZFIN;Acc:ZDB-GENE-090313-86]

Location

About this transcript

This transcript has 5 exons, is annotated with 20 domains and features, is associated with 300 variant alleles and maps to 36 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000110560.4	si:ch211-223a10.1-201	1931	544aa	ENSDARP00000102979.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QHU6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146088.2	si:ch211-223a10.1-202	857	221aa	ENSDARP00000115030.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 857 bps, Translation length: 221 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000146088.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.