Transcript: ENSDART00000146066.2 snx30-202

Description

sorting nexin family member 30 [Source:NCBI gene;Acc:550496]

Gene Synonyms

zgc:112424

Location

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 530 variant alleles and maps to 75 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000050177.7	snx30-201	2017	430aa	ENSDARP00000050176.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QDU5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146066.2	snx30-202	896	260aa	ENSDARP00000116137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCF2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 896 bps, Translation length: 260 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000146066.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.