Transcript: ENSDART00000146040.2 efnb3a-201

Description

ephrin-B3a [Source:ZFIN;Acc:ZDB-GENE-100316-1]

Gene Synonyms

si:ch73-360o10.2

Location

About this transcript

This transcript has 2 exons, is annotated with 11 domains and features, is associated with 658 variant alleles and maps to 50 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000185037.1	efnb3a-202	2791	337aa	ENSDARP00000145221.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RI02	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146040.2	efnb3a-201	346	115aa	ENSDARP00000113339.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RB71	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 346 bps, Translation length: 115 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000146040.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.