Transcript: ENSDART00000145999.2 prx-202

Description

periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]

Location

Chromosome 18: 46,223,357-46,241,775 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 469 variant alleles and maps to 173 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000017246.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000181855.1	prx-203	13177	4197aa	ENSDARP00000154877.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185021.1	prx-204	13101	4197aa	ENSDARP00000146652.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134244.3	prx-201	2247	84aa	ENSDARP00000121337.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000145999.2	prx-202	772	149aa	ENSDARP00000120367.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 4, Transcript length: 772 bps, Translation length: 149 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000145999.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000145999.2 prx-202

Summary

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Transcript: ENSDART00000145999.2 prx-202

Summary

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