Transcript: ENSDART00000145979.2 col19a1-201

Description

collagen, type XIX, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090312-196]

Gene Synonyms

si:dkey-49l3.2, stumpy, sty, zgc:153049

Location

About this transcript

This transcript has 30 exons, is annotated with 28 domains and features, is associated with 2786 variant alleles and maps to 127 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000145979.2	col19a1-201	6802	617aa	ENSDARP00000119485.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A4T5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 30, Coding exons: 30, Transcript length: 6,802 bps, Translation length: 617 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000145979.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.