Transcript: ENSDART00000145976.2 SERPINH1-201

Description

serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b [Source:ZFIN;Acc:ZDB-GENE-990415-93]

Location

Chromosome 15: 29,384,514-29,387,446 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 11 domains and features, is associated with 155 variant alleles and maps to 204 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000019949.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000035096.6	SERPINH1-203	2084	405aa	ENSDARP00000037780.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QQ04	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000115032.2	SERPINH1-205	3295	405aa	ENSDARP00000097918.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QQ04	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145976.2	SERPINH1-201	848	227aa	ENSDARP00000114717.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152365.2	SERPINH1-202	1130	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000133845.2	SERPINH1-204	804	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 848 bps, Translation length: 227 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000145976.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000145976.2 SERPINH1-201

Summary

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Transcript: ENSDART00000145976.2 SERPINH1-201

Summary

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