Transcript: ENSDART00000145964.2 pum2-202

Description

pumilio RNA-binding family member 2 [Source:ZFIN;Acc:ZDB-GENE-081031-76]

Gene Synonyms

si:ch1073-351m12.1

Location

About this transcript

This transcript has 8 exons, is annotated with 4 domains and features, is associated with 348 variant alleles and maps to 15 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000086578.6	pum2-201	3902	1209aa	ENSDARP00000081013.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R4Q6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000164090.2	pum2-203	3821	1182aa	ENSDARP00000139670.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IY44	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145964.2	pum2-202	1401	422aa	ENSDARP00000113580.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JLL6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,401 bps, Translation length: 422 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000145964.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.