Transcript: ENSDART00000145829.2 ccl34b.1-202

Description

chemokine (C-C motif) ligand 34b, duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-091204-276]

Location

Chromosome 24: 27,397,358-27,400,017 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 10 domains and features, is associated with 25 variant alleles and maps to 135 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000093608.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000165760.3	ccl34b.1-203	1488	97aa	ENSDARP00000136441.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IPJ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000145829.2	ccl34b.1-202	503	96aa	ENSDARP00000116086.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9P5Y4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000137420.2	ccl34b.1-201	383	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 503 bps, Translation length: 96 residues

Version

ENSDART00000145829.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000145829.2 ccl34b.1-202

Summary

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Transcript: ENSDART00000145829.2 ccl34b.1-202

Summary

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