Transcript: ENSDART00000145769.3 rabgap1l-204

Description

RAB GTPase activating protein 1-like [Source:ZFIN;Acc:ZDB-GENE-050208-389]

Location

About this transcript

This transcript has 13 exons, is annotated with 14 domains and features, is associated with 930 variant alleles and maps to 291 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000139523.2	rabgap1l-203	2739	302aa	ENSDARP00000116752.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000145769.3	rabgap1l-204	3181	475aa	ENSDARP00000122088.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000088460.7	rabgap1l-201	3066	1021aa	ENSDARP00000082893.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135431.2	rabgap1l-202	640	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 3,181 bps, Translation length: 475 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000145769.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.