Transcript: ENSDART00000145757.2 ddx39aa-202

Description

DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275]

Gene Synonyms

ddx39a, wu:fc87b12, zgc:55881

Location

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 5 variant alleles and maps to 113 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000014727.8	ddx39aa-201	1667	427aa	ENSDARP00000008513.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2AWA1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145757.2	ddx39aa-202	815	244aa	ENSDARP00000120822.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2AWA0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 815 bps, Translation length: 244 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000145757.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.