Transcript: ENSDART00000145660.3 si:ch211-196l7.4-202

Description

si:ch211-196l7.4 [Source:ZFIN;Acc:ZDB-GENE-050419-122]

Location

About this transcript

This transcript has 4 exons, is associated with 176 variant alleles and maps to 75 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000170210.2	si:ch211-196l7.4-204	616	41aa	ENSDARP00000140460.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145660.3	si:ch211-196l7.4-202	765	25aa	ENSDARP00000140860.1	Nonsense mediated decay	-
ENSDART00000148004.3	si:ch211-196l7.4-203	579	42aa	ENSDARP00000136553.1	Nonsense mediated decay	-
ENSDART00000133786.3	si:ch211-196l7.4-201	565	42aa	ENSDARP00000133892.1	Nonsense mediated decay	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 765 bps, Translation length: 25 residues

Version

ENSDART00000145660.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.