Transcript: ENSDART00000145613.3 shank3b-202

Description

SH3 and multiple ankyrin repeat domains 3b [Source:ZFIN;Acc:ZDB-GENE-041210-74]

Location

About this transcript

This transcript has 23 exons, is annotated with 65 domains and features, is associated with 722 variant alleles and maps to 157 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000145613.3	shank3b-202	5490	1631aa	ENSDARP00000116758.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000091809.5	shank3b-201	4812	1603aa	ENSDARP00000086242.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000183079.1	shank3b-204	4617	1538aa	ENSDARP00000153375.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000192968.1	shank3b-205	4554	1517aa	ENSDARP00000145172.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000150569.2	shank3b-203	637	103aa	ENSDARP00000125192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 23, Coding exons: 22, Transcript length: 5,490 bps, Translation length: 1,631 residues

Version

ENSDART00000145613.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.