Transcript: ENSDART00000145596.3 ITGA1-201

Description

integrin, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-091118-115]

Location

About this transcript

This transcript has 30 exons, is annotated with 54 domains and features, is associated with 4071 variant alleles and maps to 100 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000145596.3	ITGA1-201	3707	1187aa	ENSDARP00000114988.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170272.2	ITGA1-202	3543	1180aa	ENSDARP00000134365.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

Summary

Statistics

Exons: 30, Coding exons: 30, Transcript length: 3,707 bps, Translation length: 1,187 residues

Version

ENSDART00000145596.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.