Transcript: ENSDART00000145481.3 sec63-203

Description

SEC63 homolog, protein translocation regulator [Source:ZFIN;Acc:ZDB-GENE-040718-328]

Gene Synonyms

zgc:92718

Location

Chromosome 20: 32,501,763-32,506,237 forward strand.

About this transcript

This transcript has 2 exons, is associated with 185 variant alleles and maps to 77 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000017740.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000021035.9	sec63-201	4207	751aa	ENSDARP00000006629.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGI2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152944.2	sec63-204	4207	751aa	ENSDARP00000127113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGI2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131887.3	sec63-202	753	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000145481.3	sec63-203	601	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 601 bps,

Version

ENSDART00000145481.3

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000145481.3 sec63-203

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Transcript: ENSDART00000145481.3 sec63-203

Summary

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