Transcript: ENSDART00000145427.3 sypl2a-201

Description

synaptophysin-like 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1434]

Gene Synonyms

sypl, wu:fd54d09, zgc:65838

Location

About this transcript

This transcript has 6 exons, is annotated with 13 domains and features, is associated with 282 variant alleles and maps to 214 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000145427.3	sypl2a-201	4630	235aa	ENSDARP00000115067.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q7F9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161026.2	sypl2a-202	487	38aa	ENSDARP00000137278.1	Nonsense mediated decay	A0A0R4IMJ7	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 4,630 bps, Translation length: 235 residues

Version

ENSDART00000145427.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.