Transcript: ENSDART00000145420.3 DDX5-204

Description

DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]

Location

Chromosome 3: 25,270,121-25,275,367 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 20 domains and features, is associated with 537 variant alleles and maps to 290 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000038068.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000055492.7	DDX5-203	2513	617aa	ENSDARP00000055491.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q5L6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000163782.2	DDX5-206	3060	488aa	ENSDARP00000132531.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000145420.3	DDX5-204	2230	496aa	ENSDARP00000121201.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NWH7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133718.2	DDX5-201	744	217aa	ENSDARP00000122701.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147965.2	DDX5-202	372	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000145315.2	DDX5-205	1965	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,230 bps, Translation length: 496 residues

Version

ENSDART00000145420.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000145420.3 DDX5-204

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Transcript: ENSDART00000145420.3 DDX5-204

Summary

About Us

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