Transcript: ENSDART00000145348.3 si:ch211-163b2.4-202

Description

si:ch211-163b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-502]

Location

Chromosome 8: 45,004,666-45,006,486 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 11 domains and features, is associated with 96 variant alleles and maps to 17 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000094890.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000132663.3	si:ch211-163b2.4-201	4181	465aa	ENSDARP00000120066.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8WHM9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000159779.2	si:ch211-163b2.4-203	1398	465aa	ENSDARP00000130429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8WHM9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145348.3	si:ch211-163b2.4-202	775	185aa	ENSDARP00000112669.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 775 bps, Translation length: 185 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000145348.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000145348.3 si:ch211-163b2.4-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000145348.3 si:ch211-163b2.4-202

Summary

About Us

Get help

Our sister sites

Follow us