Transcript: ENSDART00000145334.3 zgc:101783-205

Description

zgc:101783 [Source:ZFIN;Acc:ZDB-GENE-040912-48]

Location

Chromosome 25: 19,733,704-19,739,357 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 4 domains and features, is associated with 4 variant alleles and maps to 81 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000045824.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000067354.4	zgc:101783-202	1146	241aa	ENSDARP00000067353.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R0K5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000067353.6	zgc:101783-201	6906	460aa	ENSDARP00000067352.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EXX9	-
ENSDART00000145334.3	zgc:101783-205	905	183aa	ENSDARP00000114821.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QDY1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000138851.3	zgc:101783-203	885	192aa	ENSDARP00000119689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QDZ6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000138946.3	zgc:101783-204	541	79aa	ENSDARP00000117849.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QEF2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000146689.2	zgc:101783-206	1241	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 905 bps, Translation length: 183 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000145334.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000145334.3 zgc:101783-205

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Transcript: ENSDART00000145334.3 zgc:101783-205

Summary

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