Transcript: ENSDART00000145328.2 apoc2-202

Description

apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]

Gene Synonyms

fb71a04, fb98g08, wu:fb52e03, wu:fb71a04, wu:fb98g08

Location

Chromosome 16: 23,984,755-23,991,161 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 175 variant alleles and maps to 197 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000092155.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000145328.2	apoc2-202	798	100aa	ENSDARP00000112765.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QEQ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000175879.2	apoc2-203	5174	114aa	ENSDARP00000144139.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286YAE3	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000142869.2	apoc2-201	534	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 798 bps, Translation length: 100 residues

Version

ENSDART00000145328.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000145328.2 apoc2-202

Summary

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Transcript: ENSDART00000145328.2 apoc2-202

Summary

About Us

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