Transcript: ENSDART00000145271.3 NCKAP1-202

Description

NCK-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4426]

Location

Chromosome 9: 44,722,236-44,757,162 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 4 domains and features, is associated with 561 variant alleles and maps to 25 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000060853.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000190578.1	NCKAP1-203	4018	1134aa	ENSDARP00000156716.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QPW3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000086176.7	NCKAP1-204	4510	1124aa	ENSDARP00000080611.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2U3TVM3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000132696.2	NCKAP1-201	4386	1128aa	ENSDARP00000116328.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S6R1-1	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000145271.3	NCKAP1-202	920	245aa	ENSDARP00000119512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 920 bps, Translation length: 245 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000145271.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000145271.3 NCKAP1-202

Summary

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Transcript: ENSDART00000145271.3 NCKAP1-202

Summary

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