Transcript: ENSDART00000145148.2 CCDC43-203

Description

coiled-coil domain containing 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1587]

Location

About this transcript

This transcript has 5 exons, is associated with 203 variant alleles and maps to 45 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000076640.6	CCDC43-201	2260	213aa	ENSDARP00000071111.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148189.3	CCDC43-202	985	163aa	ENSDARP00000112860.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000145148.2	CCDC43-203	602	92aa	ENSDARP00000115220.1	Nonsense mediated decay	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 602 bps, Translation length: 92 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000145148.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.