Transcript: ENSDART00000145122.2 clip1a-202

Description

CAP-GLY domain containing linker protein 1a [Source:ZFIN;Acc:ZDB-GENE-060526-282]

Gene Synonyms

clip1, si:dkey-273o13.1

Location

About this transcript

This transcript has 13 exons, is annotated with 30 domains and features, is associated with 840 variant alleles and maps to 120 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000114783.5	clip1a-201	4710	1569aa	ENSDARP00000099513.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F2X0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145122.2	clip1a-202	1366	436aa	ENSDARP00000119953.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R7T2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,366 bps, Translation length: 436 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000145122.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.