Transcript: ENSDART00000145003.5 prf1.3-202

Description

perforin 1.3 [Source:ZFIN;Acc:ZDB-GENE-060503-461]

Gene Synonyms

prf19b, si:dkey-89b17.6

Location

About this transcript

This transcript has 4 exons, is annotated with 16 domains and features and maps to 131 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000145003.5	prf1.3-202	1854	555aa	ENSDARP00000119684.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R8E0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000001821.8	prf1.3-201	1668	555aa	ENSDARP00000001478.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R8E0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,854 bps, Translation length: 555 residues

Version

ENSDART00000145003.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.