Transcript: ENSDART00000144973.2 vcana-201

Description

versican a [Source:ZFIN;Acc:ZDB-GENE-011023-1]

Gene Synonyms

br146, cspg2, cspg2a, sb:cb63, versican

Location

About this transcript

This transcript has 3 exons, is annotated with 15 domains and features, is associated with 249 variant alleles and maps to 264 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000186511.1	vcana-202	2013	635aa	ENSDARP00000147274.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q3K1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144973.2	vcana-201	471	157aa	ENSDARP00000119809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LXE5	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 471 bps, Translation length: 157 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000144973.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.