Transcript: ENSDART00000144964.3 zgc:174931-203

Description

zgc:174931 [Source:ZFIN;Acc:ZDB-GENE-070928-43]

Location

About this transcript

This transcript has 7 exons, is associated with 323 variant alleles and maps to 185 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000074163.5	zgc:174931-201	2462	468aa	ENSDARP00000068652.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QYG2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139224.2	zgc:174931-202	735	126aa	ENSDARP00000113923.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000144964.3	zgc:174931-203	1388	143aa	ENSDARP00000116473.1	Nonsense mediated decay	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,388 bps, Translation length: 143 residues

Version

ENSDART00000144964.3

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.