Transcript: ENSDART00000144899.2 setd4-202

Description

SET domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050808-2]

Gene Synonyms

zgc:112252

Location

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 22 variant alleles and maps to 106 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000053157.6	setd4-201	1987	440aa	ENSDARP00000053156.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E7F0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144899.2	setd4-202	789	211aa	ENSDARP00000112573.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E7F1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000145696.2	setd4-203	721	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 789 bps, Translation length: 211 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000144899.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.