Transcript: ENSDART00000144870.3 asap1a-202

Description

ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a [Source:ZFIN;Acc:ZDB-GENE-070912-129]

Gene Synonyms

si:ch211-160i2.3

Location

Chromosome 2: 32,267,898-32,352,946 reverse strand.

About this transcript

This transcript has 28 exons, is annotated with 49 domains and features, is associated with 1062 variant alleles and maps to 113 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000029463.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144870.3	asap1a-202	3615	1132aa	ENSDARP00000120481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QBI5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000169316.2	asap1a-203	8880	1097aa	ENSDARP00000136448.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IM47	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000077151.4	asap1a-201	3421	1077aa	ENSDARP00000071619.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DI91	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 28, Coding exons: 28, Transcript length: 3,615 bps, Translation length: 1,132 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000144870.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000144870.3 asap1a-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000144870.3 asap1a-202

Summary

About Us

Get help

Our sister sites

Follow us