Transcript: ENSDART00000144848.2 tmem234-203

Description

transmembrane protein 234 [Source:ZFIN;Acc:ZDB-GENE-090313-326]

Location

Chromosome 13: 33,314,847-33,317,326 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 21 domains and features, is associated with 154 variant alleles and maps to 78 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000078333.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000136701.3	tmem234-202	866	143aa	ENSDARP00000116032.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A4M2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000144848.2	tmem234-203	807	143aa	ENSDARP00000113488.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A4M3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000110295.5	tmem234-201	709	143aa	ENSDARP00000098949.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A4M2	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 807 bps, Translation length: 143 residues

Version

ENSDART00000144848.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000144848.2 tmem234-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000144848.2 tmem234-203

Summary

About Us

Get help

Our sister sites

Follow us