Transcript: ENSDART00000144816.3 LIX1-202

Description

limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]

Location

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 617 variant alleles and maps to 209 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144816.3	LIX1-202	1021	290aa	ENSDARP00000114322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2BF97	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140305.2	LIX1-201	383	128aa	ENSDARP00000115712.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,021 bps, Translation length: 290 residues

Version

ENSDART00000144816.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.