Transcript: ENSDART00000144802.3 WHRN-201

Description

whirlin b [Source:ZFIN;Acc:ZDB-GENE-060526-377]

Location

About this transcript

This transcript has 12 exons, is annotated with 37 domains and features, is associated with 2667 variant alleles and maps to 482 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144802.3	WHRN-201	7982	946aa	ENSDARP00000119523.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R807	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000087197.6	WHRN-203	3400	886aa	ENSDARP00000081631.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000132726.3	WHRN-202	718	174aa	ENSDARP00000130359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 7,982 bps, Translation length: 946 residues

Version

ENSDART00000144802.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.