Transcript: ENSDART00000144755.3 ppm1ba-202

Description

protein phosphatase, Mg2+/Mn2+ dependent, 1Ba [Source:ZFIN;Acc:ZDB-GENE-991102-16]

Gene Synonyms

pp2cb, zgc:92031

Location

About this transcript

This transcript has 7 exons, is annotated with 13 domains and features, is associated with 847 variant alleles and maps to 304 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144755.3	ppm1ba-202	3300	390aa	ENSDARP00000123249.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q68FN4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000190925.1	ppm1ba-203	1443	390aa	ENSDARP00000157035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q68FN4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000126725.3	ppm1ba-201	856	250aa	ENSDARP00000107741.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JIM0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 3,300 bps, Translation length: 390 residues

Version

ENSDART00000144755.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.