Transcript: ENSDART00000144748.2 ERGIC2-202

Description

ERGIC and golgi 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1331]

Gene Synonyms

zgc:64005

Location

About this transcript

This transcript has 2 exons, is associated with 230 variant alleles and maps to 85 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000073651.5	ERGIC2-201	1535	376aa	ENSDARP00000068141.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GPT3 Q7T2D4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180223.1	ERGIC2-203	1812	376aa	ENSDARP00000156218.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GPT3 Q7T2D4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144748.2	ERGIC2-202	487	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 487 bps,

Version

ENSDART00000144748.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.