Transcript: ENSDART00000144723.3 ppfibp2b-204

Description

PPFIA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-54]

Location

Chromosome 25: 15,994,100-16,038,477 forward strand.

About this transcript

This transcript has 21 exons, is annotated with 29 domains and features, is associated with 1006 variant alleles and maps to 224 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000029168.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000126641.3	ppfibp2b-202	1370	243aa	ENSDARP00000110323.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2CET3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000089035.6	ppfibp2b-201	5505	979aa	ENSDARP00000083468.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QB48	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000191581.1	ppfibp2b-205	5395	390aa	ENSDARP00000153470.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QLQ1	-
ENSDART00000144723.3	ppfibp2b-204	2466	822aa	ENSDARP00000119821.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000140047.2	ppfibp2b-203	597	118aa	ENSDARP00000120138.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 2,466 bps, Translation length: 822 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000144723.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000144723.3 ppfibp2b-204

Summary

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Transcript: ENSDART00000144723.3 ppfibp2b-204

Summary

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