Transcript: ENSDART00000144710.2 tpte-203

Description

transmembrane phosphatase with tensin homology [Source:ZFIN;Acc:ZDB-GENE-030131-5503]

Gene Synonyms

Dr-VSP, tpip, wu:fd20e11, wu:fi24b06

Location

Chromosome 10: 24,690,611-24,692,408 forward strand.

About this transcript

This transcript has 3 exons, is associated with 164 variant alleles and maps to 45 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000056985.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000079549.4	tpte-201	2446	511aa	ENSDARP00000074004.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QG29	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181600.1	tpte-204	1539	511aa	ENSDARP00000157510.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QG29	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144710.2	tpte-203	571	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000139930.2	tpte-202	538	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 571 bps,

Version

ENSDART00000144710.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000144710.2 tpte-203

Summary

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Transcript: ENSDART00000144710.2 tpte-203

Summary

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