Transcript: ENSDART00000144546.2 si:ch211-137a8.2-206

Description

si:ch211-137a8.2 [Source:ZFIN;Acc:ZDB-GENE-061103-172]

Gene Synonyms

zgc:152987

Location

Chromosome 15: 29,059,074-29,071,326 forward strand.

About this transcript

This transcript has 4 exons, is associated with 212 variant alleles and maps to 107 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000068926.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144126.3	si:ch211-137a8.2-205	2932	632aa	ENSDARP00000118645.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M3B132	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131755.2	si:ch211-137a8.2-201	703	199aa	ENSDARP00000112580.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000141164.3	si:ch211-137a8.2-204	543	166aa	ENSDARP00000123287.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000144546.2	si:ch211-137a8.2-206	1067	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000139220.3	si:ch211-137a8.2-203	852	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000133622.2	si:ch211-137a8.2-202	824	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,067 bps,

Version

ENSDART00000144546.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000144546.2 si:ch211-137a8.2-206

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Transcript: ENSDART00000144546.2 si:ch211-137a8.2-206

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