Transcript: ENSDART00000144545.2 rc3h1a-201

Description

ring finger and CCCH-type domains 1a [Source:ZFIN;Acc:ZDB-GENE-050208-702]

Gene Synonyms

rc3h1, si:dkey-192m14.4

Location

About this transcript

This transcript has 20 exons, is annotated with 34 domains and features, is associated with 258 variant alleles and maps to 169 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000192674.1	rc3h1a-203	3539	1111aa	ENSDARP00000154836.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000144545.2	rc3h1a-201	3648	1078aa	ENSDARP00000120858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LV60	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189703.1	rc3h1a-202	3440	1078aa	ENSDARP00000147021.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LV60	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 3,648 bps, Translation length: 1,078 residues

Version

ENSDART00000144545.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.