Transcript: ENSDART00000144544.3 col1a2-201

Description

collagen, type I, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8415]

Gene Synonyms

alpha2(I), hm:zehn2357, wu:fa98d05, wu:fa99g10, wu:fb04c08, wu:fb11d06, zehn2357

Location

About this transcript

This transcript has 50 exons, is annotated with 46 domains and features, is associated with 6 variant alleles and maps to 245 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144544.3	col1a2-201	5750	1352aa	ENSDARP00000118091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6IQX2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 50, Coding exons: 50, Transcript length: 5,750 bps, Translation length: 1,352 residues

Version

ENSDART00000144544.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

dotter confirmed [Definitions]