Transcript: ENSDART00000144543.2 acot9.1-204

Description

acyl-CoA thioesterase 9, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040724-139]

Gene Synonyms

acot9, si:rp71-1f1.1, zgc:110305

Location

Chromosome 24: 21,964,050-21,968,116 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 349 variant alleles and maps to 31 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000058352.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000030592.4	acot9.1-201	2594	434aa	ENSDARP00000037582.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R961	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000081204.5	acot9.1-202	2567	425aa	ENSDARP00000075647.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5C2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000131406.2	acot9.1-203	1016	330aa	ENSDARP00000114744.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T175	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000144543.2	acot9.1-204	536	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 536 bps,

Version

ENSDART00000144543.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000144543.2 acot9.1-204

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Transcript: ENSDART00000144543.2 acot9.1-204

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