Transcript: ENSDART00000144532.2 ssbp3b-204

Description

single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]

Gene Synonyms

SSDP1a, id:ibd1109, zgc:63791

Location

About this transcript

This transcript has 11 exons, is annotated with 16 domains and features, is associated with 696 variant alleles and maps to 32 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000039887.7	ssbp3b-201	2688	349aa	ENSDARP00000039886.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PGU6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000121984.3	ssbp3b-202	3144	373aa	ENSDARP00000109873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D0EWT5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144532.2	ssbp3b-204	859	254aa	ENSDARP00000113829.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QI58	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000136756.2	ssbp3b-203	268	69aa	ENSDARP00000118530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QIG1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 859 bps, Translation length: 254 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000144532.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.