Transcript: ENSDART00000144520.2 TMEM132C-201

Description

si:dkeyp-14d3.1 [Source:ZFIN;Acc:ZDB-GENE-081104-459]

Location

About this transcript

This transcript has 5 exons, is annotated with 13 domains and features, is associated with 2638 variant alleles and maps to 75 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000111021.4	TMEM132C-203	5667	1104aa	ENSDARP00000101176.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RAQ3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144520.2	TMEM132C-201	1996	665aa	ENSDARP00000119804.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S5X2	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000143243.2	TMEM132C-202	889	296aa	ENSDARP00000122938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QWL3	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,996 bps, Translation length: 665 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000144520.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.