Transcript: ENSDART00000144501.2 galnt9-202

Description

polypeptide N-acetylgalactosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060526-21]

Gene Synonyms

si:ch211-126h20.1

Location

About this transcript

This transcript has 7 exons, is annotated with 7 domains and features, is associated with 2108 variant alleles and maps to 129 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000038740.9	galnt9-201	6124	604aa	ENSDARP00000030418.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q6D3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144501.2	galnt9-202	992	275aa	ENSDARP00000114261.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2CEE9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147101.2	galnt9-203	495	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 992 bps, Translation length: 275 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000144501.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.