Transcript: ENSDART00000144466.2 galnt11-204

Description

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) [Source:ZFIN;Acc:ZDB-GENE-060929-998]

Location

Chromosome 24: 7,573,810-7,577,760 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 6 variant alleles and maps to 92 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000063636.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000093163.6	galnt11-201	2396	590aa	ENSDARP00000087595.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R7M5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171568.2	galnt11-205	5879	590aa	ENSDARP00000139495.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R7M5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141751.2	galnt11-203	638	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000135549.3	galnt11-202	446	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000144466.2	galnt11-204	453	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 453 bps,

Version

ENSDART00000144466.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000144466.2 galnt11-204

Summary

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Transcript: ENSDART00000144466.2 galnt11-204

Summary

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