Transcript: ENSDART00000144460.2 znf532-204

Description

zinc finger protein 532 [Source:ZFIN;Acc:ZDB-GENE-060531-40]

Gene Synonyms

si:ch211-233a1.2

Location

Chromosome 21: 10,790,680-10,795,142 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 4 domains and features, is associated with 235 variant alleles and maps to 101 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000052894.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146248.3	znf532-205	4371	1294aa	ENSDARP00000120865.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6NP92	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000084035.5	znf532-201	3858	1285aa	ENSDARP00000078470.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E7H6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000143257.3	znf532-203	609	123aa	ENSDARP00000118641.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QI93	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000144460.2	znf532-204	403	76aa	ENSDARP00000114124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QC49	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000139495.3	znf532-202	798	69aa	ENSDARP00000116373.1	Nonsense mediated decay	E9QBS5	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 403 bps, Translation length: 76 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000144460.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000144460.2 znf532-204

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Transcript: ENSDART00000144460.2 znf532-204

Summary

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