Transcript: ENSDART00000144457.2 nprl3-202

Description

NPR3-like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-1348]

Gene Synonyms

fb68d06, sb:eu985, si:ch211-5k11.11, si:xx-187g17.8, si:xx-by187g17.8, wu:fb68d06, zgc:136620

Location

About this transcript

This transcript has 5 exons, is associated with 627 variant alleles and maps to 32 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000038575.5	nprl3-201	2958	581aa	ENSDARP00000039240.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QH43	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144457.2	nprl3-202	516	61aa	ENSDARP00000114473.1	Nonsense mediated decay	F1QJH3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 516 bps, Translation length: 61 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000144457.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.